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The Gene: Part Five

In this engaging work of nonfiction, Pulitzer Prize-winning author Siddhartha Mukherjee delves into genetics, tracing how our scientific understanding of genes and heredity has changed over time.

Here are links to our lists for the book: Prologue–Part One, Part Two, Part Three, Part Four, Part Five, Part Six–Epilogue
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  1. apocryphal
    being of questionable authenticity
    There is an old story, probably apocryphal, of a Boston surgeon who did lose his memory and could only recall his friends by the names of the various operations he had performed on them.
  2. ornery
    having a difficult and contrary disposition
    The bone-by-bone reconstruction of these specimens pointed to a strongly built, prominently browed species that walked upright on somewhat bowed legs—an ornery wrestler with a permanent frown.
  3. compendium
    a concise but comprehensive summary of a larger work
    Wilson drew his crucial insight from two giants of biochemistry, Linus Pauling and Emile Zuckerkandl, who had proposed an entirely novel way to think of the genome—not just as a compendium of information to build an individual organism, but as a compendium of information for an organism’s evolutionary history: a “molecular clock.”
  4. stratum
    one of several parallel layers of material
    Crucially, Wilson realized, this method of age reconstruction was entirely self-contained and independent of bias: it made no reference to the fossil record, to linguistic lineages, geologic strata, geographical maps, or anthropological surveys.
  5. peripatetic
    traveling especially on foot
    It is called the Out of Africa theory, or the Recent Out of Africa model (the recent reflecting the surprisingly modern evolution of modern humans, and its acronym, ROAM, a loving memento to an ancient peripatetic urge that seems to rise directly out of our genomes).
  6. apotheosis
    model of excellence or perfection of a kind
    By studying the genetic characteristics of an individual you can pinpoint his or her origin to a certain continent, nationality, state, or even a tribe with remarkable accuracy. It is, to be sure, an apotheosis of small differences—but if this is what we mean by “race,” then the concept has not just survived the genomic era, it has been amplified by it.
  7. moot
    of no legal significance, as having been previously decided
    Does knowing that someone is of African versus European descent, say, allow us to refine our understanding of their genetic traits, or their personal, physical, or intellectual attributes in a meaningful manner? Or is there so much variation within Africans and Europeans that intraracial diversity dominates the comparison, thereby making the category “African” or “European” moot?
  8. purport
    have the often misleading appearance of being or intending
    Between 1890 and 1910, dozens of tests were devised in Europe and America that purported to measure intelligence in some unbiased and quantitative manner.
  9. exigency
    a pressing or urgent situation
    It morphed into the notion of “general intelligence” because of a hypothesis concerning the nature of human knowledge acquisition. And it was codified into “IQ” to serve the particular exigencies of war.
  10. cogent
    powerfully persuasive
    There can hardly be a more cogent genetic argument for equality. It is impossible to ascertain any human’s genetic potential without first equalizing environments.
  11. imbue
    fill or soak totally
    We cannot shrug this proposition away by suggesting that the current construction of the IQ test must be correct since it predicts performance in the real world. Of course it does—because the concept of IQ is powerfully self-reinforcing: it measures a quality imbued with enormous meaning and value whose job it is to propagate itself.
  12. locus
    the specific site of a particular gene on its chromosome
    When a distinct, heritable biological feature, such as a genetic illness (e.g., sickle-cell anemia), is the ascendant concern, then examining the genome to identify the locus of that feature makes absolute sense.
  13. internecine
    characterized by bloodshed and carnage for both sides
    Internecine political movements broke out frequently, shuttering the streets and businesses for weeks.
  14. vicissitude
    a variation in circumstances or fortune
    You might imagine that the sharp vicissitudes of fortune had reshaped Tulu and Bulu in drastically different ways.
  15. ineffable
    defying expression or description
    On the contrary: over the years, their physical resemblance had dwindled to the point of vanishing, but something ineffable about them—an approach, a temperament—remained remarkably similar and even amplified in its convergence.
  16. engender
    call forth
    And second, it reasoned that once established, the original random act had to be amplified and consolidated to fully engender gender.
  17. corollary
    an inference following from the proof of another proposition
    The XY system discovered by Stevens and Wilson had an important corollary: if the Y chromosome carried all the information to determine maleness, then that chromosome had to carry genes to make an embryo male.
  18. pejorative
    expressing disapproval
    Women with Swyer syndrome have male chromosomes in every cell in the body—but with the maleness-determining gene inactivated by a mutation, the Y chromosome is literally emasculated (not in a pejorative but in a purely biological sense).
  19. unilaterally
    by means of one part or party
    If genes determine sexual anatomy so unilaterally, then how do genes affect gender identity?
  20. pinion
    restrain or bind
    Pinioned to an identity that she found evidently false and discordant, she was anxious, depressed, confused, anguished, and often frankly enraged.
  21. dysphoria
    abnormal depression and discontent
    In some cases, the gender dysphoria was not as acute as David’s...
  22. ensconce
    fix firmly
    He had spent much of his life comfortably ensconced in a “normally quiet US government laboratory...jumbled floor to ceiling with beakers and vials,” studying the regulation of a gene called metallothionine—or MT—that is used by cells to respond to poisonous heavy metals, such as copper and zinc.
  23. polemic
    a verbal or written attack, especially of a belief or dogma
    “Why was Lewontin, a formidable geneticist, so determined not to believe that behavior could be inherited?” Hamer wondered. “He could not disprove the genetics of behavior in the lab and so he wrote a political polemic against it? Maybe there was room for real science here.”
  24. incontrovertible
    impossible to deny or disprove
    But the twin studies provided incontrovertible evidence that genes influenced homosexuality more strongly than, say, genes influenced the propensity for type 1 diabetes (the concordance rate among twins is only 30 percent), and almost as strongly as genes influence height (a concordance of about 55 percent).
  25. predispose
    make susceptible
    The notion that genes, of all things, could predispose humans to acquiring particular “functional selves”—possessing particular variants of temperament, personality, and identity—had unceremoniously been drummed out of universities.
  26. unequivocally
    in an unambiguous manner
    The concordance among twins for type 1 diabetes, an illness considered unequivocally genetic, is only 0.35.
  27. sublime
    inspiring awe
    It can produce the most sublime qualities in humans—exploratory drive, passion, and creative urgency—but it can also spiral toward impulsivity, addiction, violence, and depression.
  28. relegate
    assign to a class or kind
    Aspects of behavior relegated largely or even exclusively to cultures, choices, and environments, or to the unique constructions of self and identity, have turned out to be surprisingly influenced by genes.
  29. incipient
    only partly in existence; imperfectly formed
    His brother, with a genetic propensity for bipolar disorder, perceives that same conversation as a grandiose fable about his future: even the fruit seller recognizes his incipient fame.
  30. stochastic
    being or having a random variable
    The expression of end-1—i.e., the number of molecules of RNA made during a particular phase of worm development—varies between worms, most likely due to random or stochastic effects—i.e., chance. If the expression exceeds a threshold, the worm manifests the phenotype; if it is below the level, the worm manifests a different phenotype.
  31. vagary
    an unexpected and inexplicable change in something
    Genes must carry out programmed responses to environments—otherwise, there would be no conserved form. But they must also leave exactly enough room for the vagaries of chance to stick.
  32. travail
    use of physical or mental energy; hard work
    Here too, a “genetic memory” was evident: the children and grandchildren of famine-starved individuals tended to develop metabolic illnesses, as if their genomes carried some recollection of their grandparents’ metabolic travails.
  33. indoctrinate
    teach uncritically
    If cells could be indoctrinated or de-indoctrinated by manipulating their gene memories, perhaps humans could be indoctrinated as well (recall Lysenko’s attempt to achieve this with wheat strains, and Stalin’s attempts to erase the ideologies of human dissidents).
  34. credence
    the mental attitude that something is believable
    In 1961, two experiments performed less than six months, and less than twenty miles, from each other would transform the understanding of genes and lend credence to Waddington’s theory.
  35. cantankerous
    stubbornly obstructive and unwilling to cooperate
    The daughter of a civil servant and a schoolteacher, Lyon began her graduate work with the famously cantankerous Ron Fisher in Cambridge, but soon fled to Edinburgh to finish her degree, and then to a laboratory in the quiet English village of Harwell, twenty miles from Oxford, to launch her own research group.
  36. scaffold
    provide with a temporary arrangement for support
    Histones hang tightly to DNA and wrap it into coils and loops, forming scaffolds for the chromosome. When scaffolding changes, the activity of a gene can change—akin to altering the properties of a material by changing the way that it is packaged (a skein of silk packed into a ball has very different properties from that same skein stretched into a rope).
  37. skein
    coils of worsted yarn
    Histones hang tightly to DNA and wrap it into coils and loops, forming scaffolds for the chromosome. When scaffolding changes, the activity of a gene can change—akin to altering the properties of a material by changing the way that it is packaged (a skein of silk packed into a ball has very different properties from that same skein stretched into a rope).
  38. transient
    lasting a very short time
    The first changes were transient—no more, perhaps, than the turning on and turning off of genes that respond to nutrients in the environment.
  39. augur
    indicate by signs
    Hormones fanned out between organs, signaling the potential long-term deprivation of food and auguring a broader reformatting of gene expression.
  40. attenuated
    reduced in strength
    Experiments performed on worms and mice have also demonstrated the transgenerational effects of starvation, although it’s unclear whether these effects persist or are attenuated over generations.
  41. foible
    a minor weakness or peculiarity in someone's character
    Despite Menelaus’s admonitions, the blood of our fathers is lost in us—and so, fortunately, are their foibles and sins.
  42. refulgent
    radiating or as if radiating light
    Mutations, the reassortment of genes, and the erasure of memories counterbalance these forces, enabling unlikeness, variation, monstrosity, genius, and reinvention—and the refulgent possibility of new beginnings, generation upon generation.
  43. exacerbate
    make worse
    The parables of such scientific overreach are well-known: foreign animals, introduced to control pests, become pests in their own right; the raising of smokestacks, meant to alleviate urban pollution, releases particulate effluents higher in the air and exacerbates pollution; stimulating blood formation, meant to prevent heart attacks, thickens the blood and results in an increased risk of blood clots to the heart.
  44. pervade
    spread or diffuse through
    The truth turned out to be quite the opposite: just one molecule carries the code, and just one code pervades the biological world.
  45. quixotic
    not sensible about practical matters
    “It sometimes seems as if curbing entropy is our quixotic purpose in the universe,” James Gleick wrote.
Created on Fri Oct 18 17:01:37 EDT 2019 (updated Wed Oct 30 08:24:42 EDT 2019)

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